BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G04SP1|AL426261
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1457 0.0
>3x_Contig1786
Length = 33838
Score = 1457 bits (726), Expect = 0.0
Identities = 777/802 (96%), Gaps = 2/802 (0%)
Strand = Plus / Plus
Query: 1 acgtgttgacaaatacatacgahacgacagatcgcctcaattacccaacaaactgactta 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 13938 acgtgttgacaaatacatacgaaacgacagatcgcctcaattacccaacaaactgactta 13997
Query: 61 tcagttgcatgctgaggtagattgtcatatactatagagagagtctctatcactccatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13998 tcagttgcatgctgaggtagattgtcatatactatagagagagtctctatcactccatgg 14057
Query: 121 aaatwctgctactaaatccattgagttgaaagcngtttcgggtgcttgtgcacccgatac 180
|||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 14058 aaatactgctactaaatccattgagttgaaagcagtatcgggtgcttgtgcacccgatac 14117
Query: 181 tctaacctttatcttgctttgctcttgctcttagtgcttccatttgtcatacgaatgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14118 tctaacctttatcttgctttgctcttgctcttagtgcttccatttgtcatacgaatgtct 14177
Query: 241 cacagtgacaattgtcatttttttcaattttgtatctttcttttcatcgtgttttacagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14178 cacagtgacaattgtcatttttttcaattttgtatctttcttttcatcgtgttttacagt 14237
Query: 301 tcttcatcctctagaaacagaaatagaaatataaaagagccaaacgagttttcgatatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14238 tcttcatcctctagaaacagaaatagaaatataaaagagccaaacgagttttcgatatat 14297
Query: 361 athtntbtchthttggttggtatagaggtacatgaagcaagcvcgagcggattctgtact 420
|| | | || | |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 14298 atatatatcatattggttggtatagaggtacatgaagcaagcacgagcggattctgtact 14357
Query: 421 ttganataaggrggtaaggtatttwgctctctgtacaccgaa-gccctcgtaattwaaga 479
|||| |||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 14358 ttgaaataaggaggtaaggtatttagctctctgtacaccgaaggccctcgtaattaaaga 14417
Query: 480 accagggatttgttcgggaaagaatactggaaacggcctttcgttacatttttnaggaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14418 accagggatttgttcgggaaagaatactggaaacggcctttcgttacatttttaaggaag 14477
Query: 540 tbagctaataagctctattatnamttagtaattggmgcgaatmanaaaagagacagacag 599
| ||||||||||||||||||| | ||||||||||| || ||| | |||||||||||||||
Sbjct: 14478 taagctaataagctctattataaattagtaattggagcaaataaaaaaagagacagacag 14537
Query: 600 agagaggaaacagaccatgtcagctgcagatttggaattgagaaggactttgacggatgt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14538 agagaggaaacagaccatgtcagctgcagatttggaattgagaaggactttgacggatgt 14597
Query: 660 ggttgatgacgagttgaggatccacaatacgaacccgatgtctttagatatggggttcgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14598 ggttgatgacgagttgaggatccacaatacgaacccgatgtctttagatatggggttcgg 14657
Query: 720 tg-aamgcactacgattcgtttccgcaactcacgaggtcacaggtgcattcattctatac 778
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14658 tgaaacgcactacgattcgtttccgcaactcacgaggtcacaggtgcattcattctatac 14717
Query: 779 cgggcccaatttttcgtcggga 800
||||||||||||||||||||||
Sbjct: 14718 cgggcccaatttttcgtcggga 14739
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4754
Number of Sequences: 1807
Number of extensions: 4754
Number of successful extensions: 120
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)